Browse of TCMCG049C29404 protein

CDS

Accession Number	TCMCG049C29404
gbkey	CDS
Protein Id	XP_034916138.1
Location	complement(join(840391..840498,840603..840686,840984..841214,841309..841464,841546..841642,841856..842032,842148..842524,842823..842918,843195..843375,843475..843620,843746..843806,844603..845251,846429..846576,846717..846791,846914..847067,847329..847429,847509..847592,847778..847926,848038..848206,848384..848485,848569..848643,849012..849092,849251..849357,849894..849959,850044..850189,850631..850765,851857..851993,852263..852337,852468..852653,852938..853060,853186..853299,853825..853917,854324..854395,854552..854674,854775..854893,855040..855139,856471..856641,856776..856916,857014..857231,857417..857606))
Gene	LOC118050032
GeneID	118050032
Organism	Populus alba

Protein

Length	1938aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA638679
db_source	XM_035060247.1
Definition	rRNA biogenesis protein RRP5 [Populus alba]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Protein RRP5 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko03009        [VIEW IN KEGG]
KEGG_ko	ko:K14792        [VIEW IN KEGG]
EC	-
KEGG_Pathway	-
GOs	GO:0000460        [VIEW IN EMBL-EBI] GO:0000462        [VIEW IN EMBL-EBI] GO:0000466        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005515        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005886        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006364        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007275        [VIEW IN EMBL-EBI] GO:0008134        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009553        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016072        [VIEW IN EMBL-EBI] GO:0022613        [VIEW IN EMBL-EBI] GO:0030490        [VIEW IN EMBL-EBI] GO:0030684        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032040        [VIEW IN EMBL-EBI] GO:0032501        [VIEW IN EMBL-EBI] GO:0032502        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0034470        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0034660        [VIEW IN EMBL-EBI] GO:0042254        [VIEW IN EMBL-EBI] GO:0042274        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044085        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048229        [VIEW IN EMBL-EBI] GO:0048856        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0071944        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI] GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCAGCTCCCTCAAAGAAAAAACAACAGAATCCAAAACAAAACGACGGTCCAAAATTCAACAAAGCATCACAGAAGCAATTCAAAGCGAAGCAGACGAAAAACAAGAAGAGTTTTTCAAACGACGCCGTCGTAAAAGATGCGTCTATTGCTTTGCAACTTGAAGATGACGTCCCTGACTTCCCTCGAGGTGGAAAGAGTTCGTTGAGTCAGAGAGAAAGAGAGGAAATTAGAGCACAAGTTGATGAAGAATTCGAGGGGGAGGAGAGGCGTTTGAATAAGAAGAATAAGAAGGGGAAGAAGTTTCAAAACAAGAGTAGTCAATTATCTGGAGATGATTTAGGTTCCCTTTTTGGCGATGTTTTAACTGGAAAACTGCCTCGTTTTGCTAATAAGATTACAATGAAGAACATTTCTCCTGGAATGAAGCTTTGGGGAGTTGTTACTGAAGTAAACGAGAAGGACCTTGTAATTAGTCTTCCTGGAGGATTGCGTGGATTAGTACGTTCTGTGGATGCAGTTGATCCTGTTTTGAGTGATCAAATTGAGGATGGTGAAGGTAGCCTTCCAAGTGTATTCCATGTAGGGCAGCTGGTGTCATGCATTGTGTTGAAGTTGGATGATGATAAAAACGATAACAAGAAAAGAAAGATTTGGCTTTCTCTGCGCCTTTCGTTATTGCACAATGGCTTCTCATTAGATGCTGTTAAGGAAGGGATGGTCCTCACCGCATATGTCAAAAGCATTGAAGATCATGGTTTCATCCTGCATTTTGGTTTGTCATCGTTTATGGGATTTTTGCCAAAGAACAGCCAAGCTGAGAGCAGGGATTCTGAAGTGAAAACTGGGCAATTTTTACAGGGGATTGTTACAAGGATTGATAAAACTCGGAAAGTTGTTTATCTGAGCTCTGACCCAGATACAGTGTCTAAATGTGTGACTAAGGATCTTAAGGGCATTTCAATTGATCTTCTCATTCCAGGCATGATGGTTGATGCCCGTGTACAGTCGACCCTTGAAAATGGGATAATGTTATCATTCCTTACATACTTTACTGGAACTGTTGATATGTTTCATTTACAAAATACTTTCCCTACTTCAAATTGGAAGGATGATTATGCCAAGAATAAAAAGGTCAATGCTCGTATATTATTTATTGATCCCTCAACTAGAGCTGTTGGTTTGACTCTCAATCAACATCTTGTTCACAACAATTCACCGCCATCTAGTGTTAAAGTTGGAGATATTTATGACATTGCAAAAGTAGTCAGGGTAGATAAAGGCATGGGACTTCTACTTGAAATCCCATCTACTCCGCTGCCAACTCCAGCGTTTGTTAATGTATCTGATGTGGCTGAAGATGAGGTACGGAAGCTTGAAAAGAAGTTCAAGGAAGGAAGTAATGTTCGTGTTCGAATCCTTGGGTATAGGCATTTGGAAGGGCTTGCCACGGGGATTTTGAAGGCTAGTGCTTTTGAAGGATCTGTATTCACCCACTCTGATGTCAAGCCAGGCATGGCAACAAGGGCTAAAATCATAGCTGTTGACAGCTTTGGGGCTATTGTACAATTTCCTGGTGGAGTGAAGGCACTTTGCCCGCTTCGACATATGTCTGAATTTGAAATTGCGAAACCTCGGAAAAAATTCAAGGTTGGAGCTGAGCTGTTTTTCCGTGTGCTGGGTTGCAAGTCCAAGAGAATAACTGTGACACACAAGAAAACTCTTGTTAAATCTAAACTTCCAATTCTTAGTTCATATTCTGATGCAACTGATGGACTAATAACACATGGTTGGATAACAAAGATTGAAAAGCCTGGATGCTTTGTCCATTTTTACAATGGAGTCCAGGGATTTGCCCCCAGATCTGAGCTTGGATTAGAACCAGGAAGTGATGCAATTTCAACTTATCAAGTTGGGCAGGTTGTCAAATGCAGAGTAATAAGTTCTATTGCTGCTTCACGCAGGATCAATCTTAGTTTCATAATGAAGCCTCTAAGGTTTTCTGAAGAAGATGGCATCAAGATGGGTAGTGTGGTTACTGGAGTTATTGATAAAGTTACTGCCTCTTCAGTAATAGTTTATGTTAATGCAAAAGACTACTTGAAGGGGACAATTGCTACCGAGCATTTGTCAGATCACCATGAACATGCTGCCTTGATGAAGTCAGTTTTGAAGCCTGGATACGAGTTTGATCAACTACTGGTCCTAGATATTGAGAGCAACAATTTGGCTCTCTCTGCAAAATATTCTCTTATCAAGTCTGCTTCTCAGCTTCCTTCGGATCTAAGCCAGATTCGTCCTCAGTCAATAGTCCATGGGTACATCTGTAACATGATTGAAACTGGCTGCTTTGTTCGCTTTCTTGGGAATTTGACGGCTTTCTCCCCTAGAAGCAAGGCAATGGATGACCAAAGATCTCAGCTTTCAGAAGCCTTTTACGTTGGACAATCTGTTCGTAGTAATATACTCGATGTTAACAATGAAACAAGCAGAATAACAGTGTCTTTGAAGCAGTCATGCTGCTCATCTACAGATGCATGCTTTCTTCAAGAATACTTTCTCTTAGAGAACAAGATTGCTGATCTGCAATCTTCAGATTCTAAAGGTCGTGACTTGAAGTGGGTTGAAGGATTTCATATTGGCAGCACCATTGAGGGAAAAATTCAGGAGTCAAAGGAATTCGGTGTTGTTGTCAGTTTTGAGAAACATAATGATGTTTTTGGTTTTGTTTCTCATCACCAGTTAGGTGGAGCAATTGTGAAAGCAGGTGCAAATGTTCGAGCTGCTGTTCTTGATGTTGCCAAGACAGAACGCCTTGTTGATTTATCTCTAAAGCTTGAGTTTTTGGATAAATCAAGAGACAAAAGTTCTAACAGCTTAACTCACAAGAAGAAACGAAAAGGAGAGATGTCAAAGGACTTGGAGGTGCACCAAACAGTAAATGCAGTTGTTGAGATTGTGAAAGAAAATTACCTGGTTCTGTCAATTCCTGAGCATAACTATGCCATAGGTTATGCGTCGGTATCAGACTATAATACACAAAAGATATCTCAGAAACAATTTCTGAATGGACAAAGCGTTAGTGCCACAGTTATGGCTCTTCCAACCCCTTCTACTGCAGGGAGGTTGCTTTTGCTTCTGAAATCTATTAGTGAGGTGACTGAGACATCCAGTTCAAAGAAGGCCAAGAGAAAGTCTAGCTGTAATGTTGGATCCCTGGTTCAGGCAGAGATTACTGAAATCAAGCCTCTTGAAATGAGATTGAAATTCGGTATTGGTTTCCGTGGAAGGATTCATATAACAGAGGTCAACGATAATTGTCTTTTGGAGAATCCATTTAGCAACTTCAGAGTTGGCCAAACAGTGTCTGCGAGGATTATTGCTAAGGCTGGTCAATCTGACAATAAAAAAAGTCAGCTGTGGGATTTGTCTATCAAACCAAAAATGCTTGAAGATTCGTGCACGATAGAGGATAAACTTGTGCCCAAGGAATACGAGTTTTCATCTGGGCAACGCGTCTCTGGTTATGTATATAAAGTGGACGGTGAATGGGCCTGGTTAACAATATCTCGACATTTGAAGGCAAAGCTTTTTGTTCTCGACAGTGCTTGTGAACCTATTGAGCTTCAAGAATTCCAAAAAAGATTCTATGTTGGGAAGGCCGTGACTGGTCATGTTTTGAACTATAACAAGGAGAAAGCATCACTACGGTTGGCGCTCCATCCATTTGCTGCCTCTCAAACTCTTGTTGATGGGGGAGCTCCAGTTATGGATGACCTACAGAGTAATGCTCCCTGGGACAATGTTACTGCTCATATTCAAGAAGGAGATATTGTAGGTGGTAGAATTTCCAAGATACTTCCAGGTGTTGGTGGATTGCTGGTGCAACTTGGTCCTCATATACATGGCAGGGTTCATTTTACCGAACTTCAAGACTCGTGGGTTCCTGATCCATTGTCTGCATACAAAGAAGGTCAATTTGTCAAATCCAAGGTCCTAGAGATAAGCCATCCAGTCAAGGGTACCATCCACATCGATCTGTCATTACGTTTATCTTTGAATGGCTTGCTTGGTCAAAATTCAGCAGAGTTCTCGAATAATCAGGATGCTCCCAGCAAACGTGTGGATAAGATTGAGGATCTACAACCTGACATGGTTGTGCAGGGTTATGTTAAGAATGTTTCATCAAAAGGATGTTTCATTTCACTTTCAAGGAAACTTGATGCAAAAATTCTCCTCTCAAATCTGTCTGAGGGATATATTGATGATCCTGAAAAAGAATTCCCCATCGGGAAACTTTTAACTGGCCGGGTACTATCTGTGGAGCATCTATCAAAGCGAATTGAAGTTACCTTGAAATCGAGCGTAAGCAACGTGTCAAAATCTGAAAAGAGTGACCTGAGTCGCCTACATGTTGGGGAAATAATTTCTGGCAGGATTAAACGGGTGGAATCATATGGGTTGTTTATCGCACTTGACCACACAAATTTGGTTGGATTGTGTCATGTGTCACAGCTTTTGGATCATATTGGTAACATTGAATCGAAATATAAAGCTGGGGAGAAGGTTACAGCAAAGATTTTGAAGGTGGATGAGGAAAGGCGCCGAATCTCTCTTGGAATGAAGAACTTAGATGTTCGGGATGATATGAACTCTTCAAAAGAAGAATCTGATGAAGAAATGAGTGAAAATGAATCTATGGATGACAGCAATGCTCAAATAAAAATAATTCCGGAGAGCAGTTTGCTTGGTATCCATAACATTGATGTTGAATGCCAGAATGAAGGTTCAATTCTTGCCCAAGCAGAATCCAGGGCCTCAATTCCTCCGCTTGAGGTCACACTTGATGACATGGAGCACTCTCATCCAGATGATGTCCTTTTTCAAAACCAAGGGCATATTGACGAGGCAGACACTATGGTTAAGAAGAATAAACAAGAAAAGAAGAAACCAAAGAAATTGAGTGAGCAAGAAATTAGTGCTGCTGAAGAGAGACGGCTAGAGGAAGATGAACCAAGGACTGCTGATGAATTTGAGATGGTGATTCGAAGCTCTCCCAATAACAGTTTTCTTTGGATAGCATACATGCGCTTCATGCTGTCTTTGGCTGATATCGAGAAGGCTCGCTCTATTGCTGAAAGGGCTTTGAATACAATTAATATTCGAGAAGAGGATGAGAAGCTAAATATTTGGGTGGCTTACTTCAACTTGGAAAATGAATATGGAAATCCTCCTGAGGATGCTGTTAAGAAAGTATTTCAGAGAGCATTGCAATATTGTGATCCAAAGAAGGTCCATCTGGCACTCTTGAAAATGTATAAGAAGACTAATCAGAATAAATTAGCTGAGGAGCTTCTTGACAAAATGAGCAAGAAGTTCAAGCATTCATGCAAGTTTTGGTTGAAACGGGTAAAGTGGCTTCTCAAGCAAAAGCAAGATGGGGTTCAGTCTGTTGTGCAACGTGCTCTTTTATGCCTTCCTCGCCATAAGCACATCAAGTTCATCTCGCAGACAGCTATCCGTGAGTTCAAATGTGGGGTTGCTGATAGAGGGAGAACCCTGTTTGAAGAAATTTTGAGAGAATACCCAAAGAGAACAGACTTATGGAGTGTTTATCTTGATCAGGAAATTAAACTTGGAGACGCAGATGTGATTCGTGCACTTTTTGAGAGGGCAATTAGTCTGAGTCTTCCACCTAAAAAGATGAAATTTTTATTCAAGAAATATCTGGAGTATGAGAAGTCTTATGGTGATGAAAAACAGATTGAGTCTGTGAAACAGAAGGCCATGGAATATGTTCAGAATACCCTGGCCTGA

Protein:   MAAPSKKKQQNPKQNDGPKFNKASQKQFKAKQTKNKKSFSNDAVVKDASIALQLEDDVPDFPRGGKSSLSQREREEIRAQVDEEFEGEERRLNKKNKKGKKFQNKSSQLSGDDLGSLFGDVLTGKLPRFANKITMKNISPGMKLWGVVTEVNEKDLVISLPGGLRGLVRSVDAVDPVLSDQIEDGEGSLPSVFHVGQLVSCIVLKLDDDKNDNKKRKIWLSLRLSLLHNGFSLDAVKEGMVLTAYVKSIEDHGFILHFGLSSFMGFLPKNSQAESRDSEVKTGQFLQGIVTRIDKTRKVVYLSSDPDTVSKCVTKDLKGISIDLLIPGMMVDARVQSTLENGIMLSFLTYFTGTVDMFHLQNTFPTSNWKDDYAKNKKVNARILFIDPSTRAVGLTLNQHLVHNNSPPSSVKVGDIYDIAKVVRVDKGMGLLLEIPSTPLPTPAFVNVSDVAEDEVRKLEKKFKEGSNVRVRILGYRHLEGLATGILKASAFEGSVFTHSDVKPGMATRAKIIAVDSFGAIVQFPGGVKALCPLRHMSEFEIAKPRKKFKVGAELFFRVLGCKSKRITVTHKKTLVKSKLPILSSYSDATDGLITHGWITKIEKPGCFVHFYNGVQGFAPRSELGLEPGSDAISTYQVGQVVKCRVISSIAASRRINLSFIMKPLRFSEEDGIKMGSVVTGVIDKVTASSVIVYVNAKDYLKGTIATEHLSDHHEHAALMKSVLKPGYEFDQLLVLDIESNNLALSAKYSLIKSASQLPSDLSQIRPQSIVHGYICNMIETGCFVRFLGNLTAFSPRSKAMDDQRSQLSEAFYVGQSVRSNILDVNNETSRITVSLKQSCCSSTDACFLQEYFLLENKIADLQSSDSKGRDLKWVEGFHIGSTIEGKIQESKEFGVVVSFEKHNDVFGFVSHHQLGGAIVKAGANVRAAVLDVAKTERLVDLSLKLEFLDKSRDKSSNSLTHKKKRKGEMSKDLEVHQTVNAVVEIVKENYLVLSIPEHNYAIGYASVSDYNTQKISQKQFLNGQSVSATVMALPTPSTAGRLLLLLKSISEVTETSSSKKAKRKSSCNVGSLVQAEITEIKPLEMRLKFGIGFRGRIHITEVNDNCLLENPFSNFRVGQTVSARIIAKAGQSDNKKSQLWDLSIKPKMLEDSCTIEDKLVPKEYEFSSGQRVSGYVYKVDGEWAWLTISRHLKAKLFVLDSACEPIELQEFQKRFYVGKAVTGHVLNYNKEKASLRLALHPFAASQTLVDGGAPVMDDLQSNAPWDNVTAHIQEGDIVGGRISKILPGVGGLLVQLGPHIHGRVHFTELQDSWVPDPLSAYKEGQFVKSKVLEISHPVKGTIHIDLSLRLSLNGLLGQNSAEFSNNQDAPSKRVDKIEDLQPDMVVQGYVKNVSSKGCFISLSRKLDAKILLSNLSEGYIDDPEKEFPIGKLLTGRVLSVEHLSKRIEVTLKSSVSNVSKSEKSDLSRLHVGEIISGRIKRVESYGLFIALDHTNLVGLCHVSQLLDHIGNIESKYKAGEKVTAKILKVDEERRRISLGMKNLDVRDDMNSSKEESDEEMSENESMDDSNAQIKIIPESSLLGIHNIDVECQNEGSILAQAESRASIPPLEVTLDDMEHSHPDDVLFQNQGHIDEADTMVKKNKQEKKKPKKLSEQEISAAEERRLEEDEPRTADEFEMVIRSSPNNSFLWIAYMRFMLSLADIEKARSIAERALNTINIREEDEKLNIWVAYFNLENEYGNPPEDAVKKVFQRALQYCDPKKVHLALLKMYKKTNQNKLAEELLDKMSKKFKHSCKFWLKRVKWLLKQKQDGVQSVVQRALLCLPRHKHIKFISQTAIREFKCGVADRGRTLFEEILREYPKRTDLWSVYLDQEIKLGDADVIRALFERAISLSLPPKKMKFLFKKYLEYEKSYGDEKQIESVKQKAMEYVQNTLA